I'm pretty sure TSA doesn't keep records of airline schedules or things like that. So they wouldn't know if you are at the "wrong" terminal. All they know is if the boarding pass is valid or not.

Also, maybe request to your city or whoever the airport authority is, that they should consider an airport design that doesn't have "wrong terminals". At a lot of modern airports it doesn't matter what TSA checkpoint you go through because all the gates are connected behind security anyway. Such as Atlanta, Dallas/Fort Worth, etc